Class ExonSpliceCharacterizer

java.lang.Object
org.snpeff.interval.ExonSpliceCharacterizer

public class ExonSpliceCharacterizer extends Object
Characterize exons based on alternative splicing References: "Alternative splicing and evolution - diversification, exon definition and function" (see Box 1)
Author:
pablocingolani
  • Field Details

  • Constructor Details

    • ExonSpliceCharacterizer

      public ExonSpliceCharacterizer(Genome genome)
    • ExonSpliceCharacterizer

      public ExonSpliceCharacterizer(String genomeVer)
  • Method Details

    • characterize

      public CountByType characterize()
      Characterize all exons
    • setVerbose

      public void setVerbose(boolean verbose)