Class VcfNmd


public class VcfNmd extends VcfLof
An 'NMD' entry in a vcf line
Author:
pablocingolani
  • Constructor Details

    • VcfNmd

      public VcfNmd(Gene gene, double percentAffected)
    • VcfNmd

      public VcfNmd(String nmdStr)
    • VcfNmd

      public VcfNmd(String geneName, String geneId, int numTranscripts, double percentAffected)
    • VcfNmd

      public VcfNmd(VcfEntry vcfEntry, String nmdStr)
  • Method Details

    • fieldNum

      public static int fieldNum(String name)
      Convert from field name to field number